Psychrobacter alimentarius strain PAMC 27889

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter alimentarius strain PAMC 27889 is characterized by the presence of flagella, which suggests a motile nature that may aid in its adaptation to diverse environments. This strain possesses two replicons, indicating a complex genomic structure that may play a role in its metabolic versatility and survival in varying conditions. The strain is cataloged under the accession numbers NZ_CP014945.1 and NZ_CP014946.1, which provide reference points for genomic studies and further characterization. These accessions can be used by researchers to access genetic information and compare it with other strains within the Psychrobacter genus. Given its psychrophilic nature, Psychrobacter alimentarius strain PAMC 27889 is likely to thrive in cold environments, such as polar regions or deep-sea habitats. The motility conferred by its flagella may facilitate nutrient acquisition and colonization in such niches. Understanding the ecological role of this strain can provide insights into microbial life in extreme environments, as well as the potential applications of psychrophilic microorganisms in biotechnology and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter alimentarius
Strainstrain PAMC 27889

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter alimentarius strain PAMC 27889 plasmid pPAMC27889,

Gene Summary

Adenine Count

5234 bp

Thymine Count

5005 bp

Guanine Count

3358 bp

Cytosine Count

3308 bp

Genome Length

16905 bp

Protein-coding Genes

17 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system secretin gspdA3K91_RS10915P35818Negative2659520 - 266176978381.0
type ii secretion system protein nA3K91_RS10920Not AvailableNegative2661913 - 266280932050.4
type ii secretion system protein nA3K91_RS10925Not AvailableNegative2662810 - 266363430222.2
h-ns family nucleoid-associated regulatory proteinA3K91_RS10930Not AvailableNegative2663877 - 266420012398.5
hypothetical proteinA3K91_RS10935Not AvailableNegative2664661 - 266524821819.2
single-stranded dna-binding proteinA3K91_RS10940Q83EP4Negative2665910 - 266653022445.5
duf3833 domain-containing proteinA3K91_RS10945Not AvailableNegative2666796 - 266743723783.5
mfs transporterA3K91_RS10950P77726Negative2667579 - 266894348512.4
excinuclease abc subunit uvraA3K91_RS10955Q9KUW5Positive2669478 - 2672384107254.0
lyse family translocatorA3K91_RS10960A4WB82Negative2672503 - 267313222709.6

Displaying genes 2211 – 2220 of 2789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.