Psychrobacter alimentarius strain PAMC 27889

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter alimentarius strain PAMC 27889 is characterized by the presence of flagella, which suggests a motile nature that may aid in its adaptation to diverse environments. This strain possesses two replicons, indicating a complex genomic structure that may play a role in its metabolic versatility and survival in varying conditions. The strain is cataloged under the accession numbers NZ_CP014945.1 and NZ_CP014946.1, which provide reference points for genomic studies and further characterization. These accessions can be used by researchers to access genetic information and compare it with other strains within the Psychrobacter genus. Given its psychrophilic nature, Psychrobacter alimentarius strain PAMC 27889 is likely to thrive in cold environments, such as polar regions or deep-sea habitats. The motility conferred by its flagella may facilitate nutrient acquisition and colonization in such niches. Understanding the ecological role of this strain can provide insights into microbial life in extreme environments, as well as the potential applications of psychrophilic microorganisms in biotechnology and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter alimentarius
Strainstrain PAMC 27889

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter alimentarius strain PAMC 27889 plasmid pPAMC27889,

Gene Summary

Adenine Count

5234 bp

Thymine Count

5005 bp

Guanine Count

3358 bp

Cytosine Count

3308 bp

Genome Length

16905 bp

Protein-coding Genes

17 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
autotransporter domain-containing proteinA3K91_RS06840Not AvailableNegative1660106 - 166215774435.8
rhum family proteinA3K91_RS06845Not AvailableNegative1662253 - 166324537114.2
brct domain-containing proteinA3K91_RS06850Not AvailablePositive1663938 - 1667417131800.0
heat repeat domain-containing proteinA3K91_RS06855Not AvailablePositive1667464 - 1675143285191.0
hypothetical proteinA3K91_RS06860Not AvailablePositive1675133 - 167728681060.7
reverse transcriptase family proteinA3K91_RS06865P23072Positive1677290 - 167871753976.0
gdsl-type esterase/lipase family proteinA3K91_RS06870Not AvailableNegative1678791 - 167942922821.8
superoxide dismutaseA3K91_RS06875Q55587Positive1679658 - 168114254799.3
alpha-e domain-containing proteinA3K91_RS14315Not AvailablePositive1681296 - 168192824260.4
transglutaminase family proteinA3K91_RS06880Not AvailablePositive1681989 - 168277429708.3

Displaying genes 1391 – 1400 of 2789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.