Colwellia sp. PAMC 21821

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Colwellia

Description

Colwellia sp. PAMC 21821 is a rod-shaped bacterium distinguished by its motility, attributed to the presence of flagella. This species is notable for having a single replicon, which is characteristic of its genetic organization. The genomic information for Colwellia sp. PAMC 21821 is accessible under the accession number NZ_CP014943.1. The rod shape of Colwellia sp. PAMC 21821 may confer advantages in its ecological niches, potentially facilitating movement through viscous environments, such as marine sediments or waters where it may be found. The presence of flagella enhances its motility, allowing for better adaptation and survival in dynamic habitats. Colwellia species are often associated with cold environments, such as deep-sea and polar regions, where they play a role in nutrient cycling and energy flow. The motility and shape of Colwellia sp. PAMC 21821 may provide insights into its ecological role, as these traits could aid in its ability to seek out nutrients in complex and competitive microbial communities. Understanding such traits contributes to our knowledge of microbial diversity and functionality in extreme environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusColwellia
SpeciesColwellia sp. PAMC 21821
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Colwellia sp. PAMC 21821 chromosome, complete genome.

Gene Summary

Adenine Count

1500835 bp

Thymine Count

1500130 bp

Guanine Count

941539 bp

Cytosine Count

941796 bp

Genome Length

4884300 bp

Protein-coding Genes

4006 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trkh family potassium uptake proteinA3Q33_RS08395Not AvailablePositive1993298 - 199476453363.2
trk system potassium transporter trkaA3Q33_RS08400Not AvailableNegative1994802 - 199618150305.8
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbA3Q33_RS08405Not AvailableNegative1996194 - 199751049262.2
methionyl-trna formyltransferaseA3Q33_RS08410Not AvailableNegative1997513 - 199851436138.7
peptide deformylaseA3Q33_RS08415Not AvailableNegative1998563 - 199907819391.3
lysm peptidoglycan-binding domain-containing proteinA3Q33_RS08420Not AvailablePositive1999196 - 200028440167.6
dna-processing protein dpraA3Q33_RS08425Not AvailablePositive2000317 - 200145641278.1
duf494 family proteinA3Q33_RS08430Not AvailablePositive2001459 - 200193218605.4
type i dna topoisomeraseA3Q33_RS08435Not AvailablePositive2002026 - 200260121408.6
5-(carboxyamino)imidazole ribonucleotide synthaseA3Q33_RS08440Not AvailableNegative2002651 - 200380541998.4

Displaying genes 1681 – 1690 of 4107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.