Shewanella psychrophila strain WP2

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella psychrophila strain WP2 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain exhibits a facultative aerobe/anaerobe oxygen requirement, indicating its ability to thrive in both aerobic and anaerobic environments. Notably, S. psychrophila strain WP2 is psychrotolerant, with an optimal growth temperature of 16°C, allowing it to inhabit colder ecosystems effectively. The strain possesses a single replicon, which is essential for its genomic stability and replication. The genomic sequence of this strain is accessible under the accession number NZ_CP014782.1, providing valuable information for further studies on its genetic and metabolic capabilities. From an ecological perspective, the psychrotolerant nature of Shewanella psychrophila strain WP2 suggests its potential role in cold environments, such as polar regions or deep-sea habitats. Its ability to function in varying oxygen conditions may also contribute to biogeochemical cycling in these ecosystems, where it could participate in the degradation of organic matter and the reduction of metals, influencing nutrient dynamics and microbial community structure in cold habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella psychrophila
Strainstrain WP2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shewanella psychrophila strain WP2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella psychrophila strain WP2 chromosome, complete genome.

Gene Summary

Adenine Count

1809854 bp

Thymine Count

1728734 bp

Guanine Count

1340118 bp

Cytosine Count

1474700 bp

Genome Length

6353406 bp

Protein-coding Genes

5377 genes

Non-Coding Genes

203 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nicotinate-nucleotide adenylyltransferasesps_RS21560Not AvailablePositive4962663 - 496329824287.4
ribosome silencing factorsps_RS21565Not AvailablePositive4963404 - 496373312113.6
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhsps_RS21570Not AvailablePositive4963733 - 496420317401.1
penicillin-binding protein 2sps_RS21575Not AvailablePositive4964280 - 496613669460.6
rod shape-determining protein rodasps_RS21580Not AvailablePositive4966133 - 496723940779.3
lytic murein transglycosylase bsps_RS21585Not AvailablePositive4967480 - 496843635932.8
septal ring lytic transglycosylase rlpa family proteinsps_RS21590Not AvailablePositive4968518 - 496932429753.6
serine hydrolasesps_RS21595Not AvailablePositive4969480 - 497065243117.3
duf493 family protein ybedsps_RS21600Not AvailablePositive4970774 - 49710409647.6
lipoyl(octanoyl) transferase lipbsps_RS21605Not AvailablePositive4971223 - 497187624190.7

Displaying genes 4361 – 4370 of 5580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.