Shewanella psychrophila strain WP2

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella psychrophila strain WP2 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain exhibits a facultative aerobe/anaerobe oxygen requirement, indicating its ability to thrive in both aerobic and anaerobic environments. Notably, S. psychrophila strain WP2 is psychrotolerant, with an optimal growth temperature of 16°C, allowing it to inhabit colder ecosystems effectively. The strain possesses a single replicon, which is essential for its genomic stability and replication. The genomic sequence of this strain is accessible under the accession number NZ_CP014782.1, providing valuable information for further studies on its genetic and metabolic capabilities. From an ecological perspective, the psychrotolerant nature of Shewanella psychrophila strain WP2 suggests its potential role in cold environments, such as polar regions or deep-sea habitats. Its ability to function in varying oxygen conditions may also contribute to biogeochemical cycling in these ecosystems, where it could participate in the degradation of organic matter and the reduction of metals, influencing nutrient dynamics and microbial community structure in cold habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella psychrophila
Strainstrain WP2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shewanella psychrophila strain WP2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella psychrophila strain WP2 chromosome, complete genome.

Gene Summary

Adenine Count

1809854 bp

Thymine Count

1728734 bp

Guanine Count

1340118 bp

Cytosine Count

1474700 bp

Genome Length

6353406 bp

Protein-coding Genes

5377 genes

Non-Coding Genes

203 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombinase recasps_RS20195Not AvailableNegative4654189 - 465524737702.4
dna mismatch repair protein mutssps_RS20205Not AvailablePositive4655600 - 465816795705.5
rna polymerase sigma factor rpossps_RS20210Not AvailableNegative4658614 - 465958536688.1
peptidoglycan dd-metalloendopeptidase family proteinsps_RS20215Not AvailableNegative4659661 - 466045229179.2
protein-l-isoaspartate(d-aspartate) o-methyltransferasesps_RS20220Not AvailableNegative4660664 - 466129922769.7
5'/3'-nucleotidase suresps_RS20225Not AvailableNegative4661296 - 466204526404.5
trna pseudouridine(13) synthase trudsps_RS20230Not AvailableNegative4662093 - 466317240741.5
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthasesps_RS20235Not AvailableNegative4663220 - 466370517302.9
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferasesps_RS20240Not AvailableNegative4663757 - 466445825618.9
cell division protein ftsbsps_RS20245Not AvailableNegative4664495 - 466478510799.3

Displaying genes 4091 – 4100 of 5580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.