Shewanella psychrophila strain WP2

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella psychrophila strain WP2 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitates motility. This strain exhibits a facultative aerobe/anaerobe oxygen requirement, indicating its ability to thrive in both aerobic and anaerobic environments. Notably, S. psychrophila strain WP2 is psychrotolerant, with an optimal growth temperature of 16°C, allowing it to inhabit colder ecosystems effectively. The strain possesses a single replicon, which is essential for its genomic stability and replication. The genomic sequence of this strain is accessible under the accession number NZ_CP014782.1, providing valuable information for further studies on its genetic and metabolic capabilities. From an ecological perspective, the psychrotolerant nature of Shewanella psychrophila strain WP2 suggests its potential role in cold environments, such as polar regions or deep-sea habitats. Its ability to function in varying oxygen conditions may also contribute to biogeochemical cycling in these ecosystems, where it could participate in the degradation of organic matter and the reduction of metals, influencing nutrient dynamics and microbial community structure in cold habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella psychrophila
Strainstrain WP2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Shewanella psychrophila strain WP2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella psychrophila strain WP2 chromosome, complete genome.

Gene Summary

Adenine Count

1809854 bp

Thymine Count

1728734 bp

Guanine Count

1340118 bp

Cytosine Count

1474700 bp

Genome Length

6353406 bp

Protein-coding Genes

5377 genes

Non-Coding Genes

203 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
t6ss effector bth_i2691 family proteinsps_RS05115Not AvailableNegative1144378 - 1147710123796.0
duf4123 domain-containing proteinsps_RS05120Not AvailableNegative1147707 - 114869638088.1
type vi secretion system vgr family proteinsps_RS05125Not AvailableNegative1148693 - 115080477516.0
hcp family type vi secretion system effectorsps_RS05130Not AvailableNegative1151145 - 115166319205.6
type vi secretion system impa family n-terminal domain-containing proteinsps_RS05135Not AvailableNegative1151910 - 115317546646.8
type vi secretion system membrane subunit tssmsps_RS05140Not AvailableNegative1153272 - 1156835135675.0
type vi secretion system protein tssasps_RS05145Not AvailableNegative1156854 - 115825751549.3
type vi secretion system-associated protein vasisps_RS05150Not AvailableNegative1158263 - 115890123479.4
sigma-54-dependent fis family transcriptional regulatorsps_RS05155Not AvailableNegative1158901 - 116046058789.6
type vi secretion system atpase tsshsps_RS05160Not AvailableNegative1160460 - 116304595259.5

Displaying genes 1131 – 1140 of 5580 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.