Hymenobacter psoromatis strain PAMC 26554

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter psoromatis strain PAMC 26554 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses three distinct replicons, which suggests a complex genomic structure that may facilitate its adaptability and survival in various environments. The genetic information for this strain can be accessed through the following accession numbers: NZ_CP014769.1, NZ_CP014770.1, and NZ_CP014771.1. The presence of multiple replicons in Hymenobacter psoromatis is significant, as it may provide insights into its genomic stability and capability for horizontal gene transfer. Such traits are often associated with enhanced metabolic versatility, allowing bacteria to thrive in diverse ecological niches. Hymenobacter species are commonly found in soil and can be involved in the decomposition of organic materials, indicating potential roles in nutrient cycling and environmental processes. Understanding the genomic characteristics of Hymenobacter psoromatis strain PAMC 26554 can contribute to a greater awareness of its ecological role. Given its adaptability and potential interactions within microbial communities, this bacterium may serve important functions in environmental microbiology, particularly in soil ecosystems where it may influence organic matter breakdown and nutrient availability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter psoromatis
Strainstrain PAMC 26554

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter psoromatis strain PAMC 26554 chromosome, complete

Gene Summary

Adenine Count

1024537 bp

Thymine Count

1024585 bp

Guanine Count

1594373 bp

Cytosine Count

1601348 bp

Genome Length

5244843 bp

Protein-coding Genes

4561 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose-phosphate pyrophosphokinaseA0257_RS19030Not AvailableNegative4220431 - 422136033609.9
5-dehydro-4-deoxy-d-glucuronate isomeraseA0257_RS19035Not AvailableNegative4221807 - 422263730408.3
2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdudA0257_RS19040Not AvailableNegative4222863 - 422362726513.4
hybrid sensor histidine kinase/response regulator transcription factorA0257_RS19045Not AvailableNegative4223844 - 4228151158526.0
beta-galactosidase family proteinA0257_RS19050Not AvailablePositive4228454 - 423034369793.9
susc/raga family tonb-linked outer membrane proteinA0257_RS19055Not AvailablePositive4230781 - 423261965238.3
tonb-dependent receptorA0257_RS19060Not AvailablePositive4232674 - 423388844264.3
ragb/susd family nutrient uptake outer membrane proteinA0257_RS19065Not AvailablePositive4233910 - 423544556864.8
glycoside hydrolaseA0257_RS19070Not AvailablePositive4235545 - 423709554866.3
beta-galactosidase small subunitA0257_RS19075Not AvailablePositive4237150 - 423803733234.1

Displaying genes 3731 – 3740 of 4832 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.