Hymenobacter psoromatis strain PAMC 26554

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter psoromatis strain PAMC 26554 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses three distinct replicons, which suggests a complex genomic structure that may facilitate its adaptability and survival in various environments. The genetic information for this strain can be accessed through the following accession numbers: NZ_CP014769.1, NZ_CP014770.1, and NZ_CP014771.1. The presence of multiple replicons in Hymenobacter psoromatis is significant, as it may provide insights into its genomic stability and capability for horizontal gene transfer. Such traits are often associated with enhanced metabolic versatility, allowing bacteria to thrive in diverse ecological niches. Hymenobacter species are commonly found in soil and can be involved in the decomposition of organic materials, indicating potential roles in nutrient cycling and environmental processes. Understanding the genomic characteristics of Hymenobacter psoromatis strain PAMC 26554 can contribute to a greater awareness of its ecological role. Given its adaptability and potential interactions within microbial communities, this bacterium may serve important functions in environmental microbiology, particularly in soil ecosystems where it may influence organic matter breakdown and nutrient availability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter psoromatis
Strainstrain PAMC 26554

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter psoromatis strain PAMC 26554 chromosome, complete

Gene Summary

Adenine Count

1024537 bp

Thymine Count

1024585 bp

Guanine Count

1594373 bp

Cytosine Count

1601348 bp

Genome Length

5244843 bp

Protein-coding Genes

4561 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinA0257_RS23875Not AvailablePositive3339423 - 333980914140.9
duf721 domain-containing proteinA0257_RS15210Not AvailableNegative3340106 - 334042311576.5
dna replication/repair protein recfA0257_RS15215Not AvailableNegative3340534 - 334166142107.1
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaA0257_RS15220Not AvailablePositive3341738 - 334291943195.1
tetratricopeptide repeat proteinA0257_RS15225Not AvailablePositive3343013 - 334377727550.2
6,7-dimethyl-8-ribityllumazine synthaseA0257_RS15230Not AvailablePositive3343959 - 334443517065.3
trar/dksa c4-type zinc finger proteinA0257_RS15235Not AvailablePositive3344626 - 334500914359.0
pseudouridine synthaseA0257_RS15240Not AvailablePositive3345170 - 334723975878.3
type iii pantothenate kinaseA0257_RS15245Not AvailablePositive3347317 - 334807526463.0
hypothetical proteinA0257_RS15250Not AvailablePositive3348062 - 334938746988.5

Displaying genes 2941 – 2950 of 4832 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.