Hymenobacter psoromatis strain PAMC 26554

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter psoromatis strain PAMC 26554 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses three distinct replicons, which suggests a complex genomic structure that may facilitate its adaptability and survival in various environments. The genetic information for this strain can be accessed through the following accession numbers: NZ_CP014769.1, NZ_CP014770.1, and NZ_CP014771.1. The presence of multiple replicons in Hymenobacter psoromatis is significant, as it may provide insights into its genomic stability and capability for horizontal gene transfer. Such traits are often associated with enhanced metabolic versatility, allowing bacteria to thrive in diverse ecological niches. Hymenobacter species are commonly found in soil and can be involved in the decomposition of organic materials, indicating potential roles in nutrient cycling and environmental processes. Understanding the genomic characteristics of Hymenobacter psoromatis strain PAMC 26554 can contribute to a greater awareness of its ecological role. Given its adaptability and potential interactions within microbial communities, this bacterium may serve important functions in environmental microbiology, particularly in soil ecosystems where it may influence organic matter breakdown and nutrient availability.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter psoromatis
Strainstrain PAMC 26554

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter psoromatis strain PAMC 26554 chromosome, complete

Gene Summary

Adenine Count

1024537 bp

Thymine Count

1024585 bp

Guanine Count

1594373 bp

Cytosine Count

1601348 bp

Genome Length

5244843 bp

Protein-coding Genes

4561 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine hydrolase domain-containing proteinA0257_RS13825Not AvailableNegative3031878 - 303297239924.0
serine hydrolase domain-containing proteinA0257_RS13830Not AvailableNegative3033197 - 303435742618.3
geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthaseA0257_RS13835Not AvailableNegative3034410 - 303516526214.2
hypothetical proteinA0257_RS13840Not AvailableNegative3035158 - 303612634463.9
phage holin family proteinA0257_RS13845Not AvailableNegative3036174 - 303654513373.4
j domain-containing proteinA0257_RS13850Not AvailablePositive3036684 - 303784443074.2
ypda family putative bacillithiol disulfide reductaseA0257_RS13855Not AvailableNegative3037860 - 303884635725.0
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigA0257_RS13860Not AvailablePositive3038996 - 303990734596.6
bacteriorhodopsinA0257_RS13865Not AvailablePositive3040239 - 304101529120.0
carboxypeptidase-like regulatory domain-containing proteinA0257_RS13870Not AvailablePositive3041098 - 304202432895.6

Displaying genes 2651 – 2660 of 4832 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.