Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit gamma | AX767_RS04735 | Not Available | Positive | 929275 - 929898 | 23574.3 |
| formate dehydrogenase accessory protein fdhe | AX767_RS04740 | Not Available | Positive | 929909 - 930940 | 37017.2 |
| l-seryl-trna(sec) selenium transferase | AX767_RS04745 | Not Available | Positive | 930940 - 932388 | 50643.0 |
| acyl-coa dehydrogenase family protein | AX767_RS04750 | Not Available | Positive | 932414 - 933529 | 38782.5 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | AX767_RS04755 | Not Available | Positive | 933540 - 934403 | 31602.6 |
| ferritin-like domain-containing protein | AX767_RS04760 | Not Available | Positive | 934369 - 935574 | 43329.3 |
| selenocysteine-specific translation elongation factor | AX767_RS04765 | Not Available | Positive | 935591 - 937489 | 67764.6 |
| Trna-sec | Not Available | Not Available | Positive | 937508 - 937597 | Not Available |
| hypothetical protein | AX767_RS20915 | Not Available | Positive | 937695 - 937931 | 8308.82 |
| hypothetical protein | AX767_RS04775 | Not Available | Negative | 937915 - 938430 | 18691.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
