Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-2 protease family protein | AX767_RS04630 | Not Available | Positive | 908960 - 909631 | 24405.7 |
| tryptophan--trna ligase | AX767_RS04635 | Not Available | Positive | 909641 - 910969 | 48458.6 |
| luxr c-terminal-related transcriptional regulator | AX767_RS04640 | Not Available | Positive | 911040 - 911642 | 21880.5 |
| surface-behavior sensor histidine kinase shks | AX767_RS04645 | Not Available | Negative | 911663 - 913099 | 53097.6 |
| Trna-ser | Not Available | Not Available | Positive | 913192 - 913279 | Not Available |
| serine--trna ligase | AX767_RS04655 | Not Available | Negative | 913326 - 914657 | 48261.8 |
| threonine/serine dehydratase | AX767_RS04660 | Not Available | Negative | 914729 - 915679 | 32951.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | AX767_RS04665 | Not Available | Negative | 915691 - 916668 | 35156.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | AX767_RS04670 | Not Available | Negative | 916665 - 917126 | 16104.0 |
| radc family protein | AX767_RS04675 | Not Available | Positive | 917213 - 917890 | 24245.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
