Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | AX767_RS04420 | Not Available | Positive | 866758 - 867261 | 18334.5 |
| gntr family transcriptional regulator | AX767_RS04425 | Not Available | Negative | 867286 - 868308 | 37456.5 |
| amino acid abc transporter permease | AX767_RS04430 | Not Available | Positive | 868446 - 869129 | 25205.6 |
| amino acid abc transporter permease | AX767_RS04435 | Not Available | Positive | 869158 - 869802 | 23105.9 |
| amino acid abc transporter atp-binding protein | AX767_RS04440 | Not Available | Positive | 869844 - 870572 | 26307.2 |
| transporter substrate-binding domain-containing protein | AX767_RS04445 | Not Available | Positive | 870624 - 871421 | 28579.6 |
| uxaa family hydrolase | AX767_RS04450 | Not Available | Positive | 871445 - 873019 | 55397.0 |
| dihydrodipicolinate synthase family protein | AX767_RS04455 | Not Available | Positive | 873063 - 873989 | 33465.5 |
| aldehyde dehydrogenase family protein | AX767_RS04460 | Not Available | Positive | 874000 - 875436 | 50788.8 |
| sugar abc transporter substrate-binding protein | AX767_RS04465 | Not Available | Positive | 875615 - 876739 | 39992.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
