Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AX767_RS04370 | Not Available | Positive | 858766 - 859536 | 28006.0 |
| nucleoside deaminase | AX767_RS04375 | Not Available | Positive | 859533 - 860015 | 17202.5 |
| cina family protein | AX767_RS04380 | Not Available | Negative | 860022 - 860516 | 16975.4 |
| yebc/pmpr family dna-binding transcriptional regulator | AX767_RS04385 | Not Available | Negative | 860520 - 861233 | 25222.9 |
| nadh:flavin oxidoreductase/nadh oxidase | AX767_RS04390 | Not Available | Positive | 861314 - 862429 | 39791.2 |
| fad-binding oxidoreductase | AX767_RS04395 | Not Available | Negative | 862438 - 863184 | 26311.4 |
| sulfite oxidase-like oxidoreductase | AX767_RS04400 | Not Available | Negative | 863181 - 863792 | 23022.1 |
| aromatic ring-hydroxylating oxygenase subunit alpha | AX767_RS04405 | Not Available | Negative | 863826 - 864902 | 40825.4 |
| c40 family peptidase | AX767_RS04410 | Not Available | Positive | 865102 - 865563 | 16188.3 |
| abc transporter substrate-binding protein | AX767_RS04415 | Not Available | Positive | 865733 - 866761 | 37177.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
