Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | AX767_RS00035 | Not Available | Negative | 4585 - 5034 | 16548.9 |
| class i sam-dependent methyltransferase | AX767_RS00040 | Not Available | Negative | 5048 - 5800 | 28657.6 |
| hydroxyacylglutathione hydrolase | AX767_RS00045 | Not Available | Positive | 5820 - 6599 | 28056.4 |
| serine hydrolase domain-containing protein | AX767_RS00050 | Not Available | Positive | 6596 - 8232 | 56908.8 |
| abc transporter permease | AX767_RS00055 | Not Available | Negative | 8260 - 9093 | 30244.5 |
| abc transporter atp-binding protein | AX767_RS00060 | Not Available | Negative | 9093 - 9917 | 30158.3 |
| abc transporter substrate-binding protein | AX767_RS00065 | Not Available | Negative | 9985 - 11022 | 36221.6 |
| mapeg family protein | AX767_RS00070 | Not Available | Negative | 11103 - 11495 | 14213.4 |
| recombination mediator recr | AX767_RS00075 | Not Available | Negative | 11516 - 12106 | 21050.2 |
| ybab/ebfc family nucleoid-associated protein | AX767_RS00080 | Not Available | Negative | 12122 - 12454 | 11814.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
