Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | AX767_RS04270 | Not Available | Positive | 831363 - 832028 | 24509.6 |
| allantoinase puue | AX767_RS04275 | Not Available | Positive | 832063 - 832977 | 35001.5 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | AX767_RS04280 | Not Available | Positive | 832981 - 834756 | 64582.9 |
| m20 family metallopeptidase | AX767_RS04285 | Not Available | Positive | 834753 - 835976 | 44153.6 |
| lysr family transcriptional regulator | AX767_RS04290 | Not Available | Negative | 836005 - 836904 | 32501.4 |
| nucleobase:cation symporter-2 family protein | AX767_RS04295 | Not Available | Positive | 837027 - 838514 | 51279.9 |
| ncs1 family nucleobase:cation symporter-1 | AX767_RS04300 | Not Available | Positive | 838713 - 840149 | 52451.3 |
| c4-dicarboxylate transporter dcta | AX767_RS04305 | Not Available | Positive | 840169 - 841485 | 45901.0 |
| ai-2e family transporter | AX767_RS04310 | Not Available | Positive | 841558 - 842628 | 38592.4 |
| lysr family transcriptional regulator | AX767_RS04315 | Not Available | Negative | 842644 - 843558 | 33402.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
