Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| retropepsin-like aspartic protease family protein | AX767_RS03935 | Not Available | Positive | 756205 - 756849 | 22274.0 |
| rida family protein | AX767_RS03940 | Not Available | Negative | 756872 - 757225 | 12675.3 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | AX767_RS03945 | Not Available | Negative | 757231 - 757866 | 22156.5 |
| aldo/keto reductase | AX767_RS03950 | Not Available | Negative | 757958 - 759019 | 39072.6 |
| abc transporter atp-binding protein | AX767_RS03955 | Not Available | Negative | 759061 - 760152 | 39859.2 |
| abc transporter permease | AX767_RS03960 | Not Available | Negative | 760167 - 761852 | 60648.9 |
| abc transporter substrate-binding protein | AX767_RS03965 | Not Available | Negative | 761888 - 763213 | 48065.7 |
| alpha/beta fold hydrolase | AX767_RS03970 | Not Available | Positive | 763332 - 764234 | 33784.4 |
| response regulator | AX767_RS03975 | Not Available | Positive | 764329 - 767820 | 127368.0 |
| cher family methyltransferase | AX767_RS03980 | Not Available | Positive | 767859 - 768641 | 29391.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
