Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | AX767_RS03405 | Not Available | Positive | 656940 - 657770 | 31428.3 |
| dihydrofolate reductase | AX767_RS03410 | Not Available | Positive | 657773 - 658267 | 18019.6 |
| plasmid replication/partition related protein | AX767_RS03415 | Not Available | Negative | 658276 - 659046 | 27630.8 |
| bon domain-containing protein | AX767_RS03420 | Not Available | Negative | 659450 - 659995 | 19892.7 |
| universal stress protein | AX767_RS03425 | Not Available | Negative | 659992 - 660186 | 6562.21 |
| cation-translocating p-type atpase | AX767_RS03430 | Not Available | Negative | 660303 - 663170 | 99983.1 |
| hypothetical protein | AX767_RS03435 | Not Available | Negative | 663160 - 663552 | 14596.5 |
| abc transporter atp-binding protein | AX767_RS03440 | Not Available | Negative | 663646 - 664326 | 24403.4 |
| ftsx-like permease family protein | AX767_RS03445 | Not Available | Negative | 664319 - 665584 | 44296.8 |
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS21780 | Not Available | Negative | 665590 - 666837 | 43264.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
