Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase family protein | AX767_RS03255 | Not Available | Positive | 629133 - 629675 | 18134.4 |
| nucleotidyltransferase family protein | AX767_RS03260 | Not Available | Negative | 629672 - 630235 | 19093.0 |
| pyridoxamine 5'-phosphate oxidase | AX767_RS03265 | Not Available | Positive | 630265 - 630918 | 24659.1 |
| duf4124 domain-containing protein | AX767_RS03270 | Not Available | Negative | 630938 - 631204 | 9479.46 |
| tonb-dependent receptor | AX767_RS03275 | Not Available | Negative | 631334 - 633415 | 74494.5 |
| hypothetical protein | AX767_RS03280 | Not Available | Negative | 633506 - 633877 | 13176.9 |
| peptide-methionine (s)-s-oxide reductase msra | AX767_RS03285 | Not Available | Negative | 633882 - 634427 | 19926.4 |
| tetr/acrr family transcriptional regulator | AX767_RS03290 | Not Available | Positive | 634542 - 635219 | 25469.7 |
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS03295 | Not Available | Positive | 635216 - 636358 | 39146.7 |
| efflux rnd transporter permease subunit | AX767_RS03300 | Not Available | Positive | 636374 - 639589 | 116840.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
