Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(3+) abc transporter substrate-binding protein | AX767_RS03205 | Not Available | Positive | 620322 - 621371 | 37177.9 |
| abc transporter permease | AX767_RS03210 | Not Available | Positive | 621368 - 623029 | 57826.2 |
| abc transporter atp-binding protein | AX767_RS03215 | Not Available | Positive | 623026 - 623718 | 24734.0 |
| lactoylglutathione lyase | AX767_RS03220 | Not Available | Positive | 623715 - 624125 | 14865.7 |
| paai family thioesterase | AX767_RS03225 | Not Available | Positive | 624132 - 624533 | 14408.4 |
| haloacid dehalogenase type ii | AX767_RS03230 | Not Available | Negative | 624535 - 625260 | 25902.2 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | AX767_RS03235 | Not Available | Negative | 625265 - 625906 | 22065.8 |
| phosphogluconate dehydratase | AX767_RS03240 | Not Available | Negative | 625897 - 627726 | 63844.9 |
| ompa family protein | AX767_RS03245 | Not Available | Negative | 627837 - 628376 | 18478.1 |
| gamma-glutamylcyclotransferase | AX767_RS03250 | Not Available | Positive | 628464 - 629048 | 22166.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
