Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | AX767_RS03155 | Not Available | Positive | 609160 - 610107 | 34171.9 |
| abc transporter atp-binding protein | AX767_RS03160 | Not Available | Positive | 610104 - 610838 | 26526.6 |
| abc transporter atp-binding protein | AX767_RS03165 | Not Available | Positive | 610828 - 611535 | 25464.4 |
| indolepyruvate ferredoxin oxidoreductase family protein | AX767_RS03170 | Not Available | Negative | 611596 - 615084 | 125863.0 |
| gntr family transcriptional regulator | AX767_RS03175 | Not Available | Positive | 615262 - 616041 | 29468.4 |
| hypothetical protein | AX767_RS03180 | Not Available | Positive | 616149 - 616472 | 12682.9 |
| mate family efflux transporter | AX767_RS03185 | Not Available | Negative | 616485 - 617900 | 48961.6 |
| mfs transporter | AX767_RS03190 | Not Available | Negative | 617897 - 619153 | 42867.8 |
| marr family winged helix-turn-helix transcriptional regulator | AX767_RS03195 | Not Available | Negative | 619146 - 619613 | 17210.8 |
| paai family thioesterase | AX767_RS03200 | Not Available | Positive | 619664 - 620206 | 19034.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
