Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | AX767_RS03105 | Not Available | Negative | 599365 - 600222 | 31561.1 |
| carbohydrate abc transporter permease | AX767_RS03110 | Not Available | Negative | 600219 - 601085 | 32685.0 |
| abc transporter substrate-binding protein | AX767_RS03115 | Not Available | Negative | 601219 - 602601 | 51843.7 |
| fadr/gntr family transcriptional regulator | AX767_RS03120 | Not Available | Negative | 602661 - 603404 | 26789.5 |
| 2-hydroxyacid dehydrogenase | AX767_RS03125 | Not Available | Negative | 603413 - 604357 | 33216.4 |
| 2-dehydro-3-deoxygalactonokinase | AX767_RS03130 | Not Available | Positive | 604530 - 605414 | 31173.4 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | AX767_RS03135 | Not Available | Positive | 605411 - 606070 | 22585.7 |
| aldolase | AX767_RS03140 | Not Available | Positive | 606060 - 606788 | 26353.5 |
| abc transporter substrate-binding protein | AX767_RS03145 | Not Available | Positive | 606962 - 608188 | 44061.0 |
| branched-chain amino acid abc transporter permease | AX767_RS03150 | Not Available | Positive | 608290 - 609144 | 29724.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
