Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fdhf/ydep family oxidoreductase | AX767_RS03055 | Not Available | Positive | 586458 - 588749 | 82635.6 |
| putative zinc-binding metallopeptidase | AX767_RS22005 | Not Available | Negative | 588746 - 589120 | 13873.1 |
| serine hydrolase domain-containing protein | AX767_RS22010 | Not Available | Negative | 589248 - 590117 | 31883.4 |
| p1 family peptidase | AX767_RS03070 | Not Available | Positive | 590074 - 591102 | 34331.4 |
| taxi family trap transporter solute-binding subunit | AX767_RS03075 | Not Available | Positive | 591119 - 592495 | 50237.6 |
| energy-dependent translational throttle protein etta | AX767_RS03080 | Not Available | Negative | 592538 - 594199 | 61577.4 |
| dead/deah box helicase | AX767_RS03085 | Not Available | Positive | 594504 - 596285 | 62422.4 |
| l-idonate 5-dehydrogenase | AX767_RS03090 | Not Available | Negative | 596388 - 597422 | 36329.0 |
| glucose 1-dehydrogenase | AX767_RS03095 | Not Available | Negative | 597434 - 598207 | 27154.6 |
| abc transporter atp-binding protein | AX767_RS03100 | Not Available | Negative | 598282 - 599352 | 38569.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
