Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS03005 | Not Available | Negative | 577314 - 577676 | 12971.4 |
| isocitrate lyase/pep mutase family protein | AX767_RS03010 | Not Available | Positive | 577829 - 578689 | 29919.2 |
| duf1439 domain-containing protein | AX767_RS03015 | Not Available | Positive | 578698 - 579252 | 20164.3 |
| glycerophosphodiester phosphodiesterase | AX767_RS03020 | Not Available | Positive | 579263 - 580282 | 36199.3 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | AX767_RS03025 | Not Available | Negative | 580268 - 580735 | 17153.4 |
| heavy metal translocating p-type atpase | AX767_RS03030 | Not Available | Positive | 580810 - 582840 | 70081.1 |
| duf2946 family protein | AX767_RS03035 | Not Available | Positive | 582851 - 583237 | 13009.5 |
| tolc family protein | AX767_RS03040 | Not Available | Positive | 583313 - 584665 | 48338.6 |
| multicopper oxidase family protein | AX767_RS03045 | Not Available | Positive | 584662 - 586053 | 50812.1 |
| copper-binding protein | AX767_RS03050 | Not Available | Positive | 586074 - 586379 | 10810.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
