Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynce family protein | AX767_RS02865 | Not Available | Positive | 553176 - 554369 | 41616.2 |
| hypothetical protein | AX767_RS02870 | Not Available | Positive | 554398 - 554583 | 6321.07 |
| thiamine-binding protein | AX767_RS02875 | Not Available | Positive | 554835 - 555266 | 15077.2 |
| duf808 domain-containing protein | AX767_RS02880 | Not Available | Negative | 555285 - 556190 | 30979.4 |
| gnat family n-acetyltransferase | AX767_RS02885 | Not Available | Negative | 556195 - 556713 | 19380.9 |
| hypothetical protein | AX767_RS21505 | Not Available | Positive | 556822 - 556971 | 5271.5 |
| vf530 family dna-binding protein | AX767_RS02890 | Not Available | Positive | 556968 - 557234 | 10038.0 |
| 2fe-2s iron-sulfur cluster-binding protein | AX767_RS02895 | Not Available | Positive | 557242 - 557523 | 10056.0 |
| mfs transporter | AX767_RS02900 | Not Available | Negative | 557520 - 558689 | 40836.4 |
| rlua family pseudouridine synthase | AX767_RS02905 | Not Available | Positive | 558799 - 559437 | 23079.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
