Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | AX767_RS02815 | Not Available | Negative | 544350 - 544733 | 14189.8 |
| glutamate--cysteine ligase | AX767_RS02820 | Not Available | Negative | 544887 - 546440 | 56722.3 |
| alpha/beta hydrolase | AX767_RS02825 | Not Available | Negative | 546537 - 547208 | 23583.4 |
| hypothetical protein | AX767_RS02830 | Not Available | Positive | 547320 - 547655 | 11505.1 |
| glutathione s-transferase family protein | AX767_RS02835 | Not Available | Positive | 547694 - 548341 | 23681.8 |
| glutathione s-transferase | AX767_RS02840 | Not Available | Positive | 548394 - 549002 | 22226.8 |
| collagen-like triple helix repeat-containing protein | AX767_RS22090 | Not Available | Positive | 549222 - 550691 | 42457.4 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | AX767_RS02850 | Not Available | Positive | 550688 - 552394 | 60312.3 |
| hypothetical protein | AX767_RS02855 | Not Available | Negative | 552398 - 552811 | 14898.1 |
| duf2164 domain-containing protein | AX767_RS02860 | Not Available | Negative | 552808 - 553080 | 10449.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
