Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan dd-metalloendopeptidase family protein | AX767_RS02765 | Not Available | Positive | 537496 - 538386 | 31323.8 |
| pseudouridine synthase | AX767_RS02770 | Not Available | Positive | 538397 - 538936 | 19857.1 |
| hypothetical protein | AX767_RS02775 | Not Available | Negative | 538944 - 539336 | 14373.0 |
| serine hydrolase domain-containing protein | AX767_RS02780 | Not Available | Negative | 539333 - 540269 | 33931.4 |
| hypothetical protein | AX767_RS02785 | Not Available | Positive | 540364 - 540582 | 7692.91 |
| paai family thioesterase | AX767_RS02790 | Not Available | Negative | 540598 - 541002 | 14146.0 |
| ferritin-like domain-containing protein | AX767_RS02795 | Not Available | Negative | 541247 - 541747 | 17862.1 |
| ribosome biogenesis gtpase ylqf | AX767_RS02800 | Not Available | Negative | 541864 - 542826 | 34778.1 |
| hpf/raia family ribosome-associated protein | AX767_RS02805 | Not Available | Positive | 542951 - 543310 | 13406.6 |
| sdr family nad(p)-dependent oxidoreductase | AX767_RS02810 | Not Available | Negative | 543321 - 544244 | 31472.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
