Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb/maze/spovt family dna-binding domain-containing protein | AX767_RS02715 | Not Available | Positive | 528859 - 529128 | 9776.76 |
| pin domain-containing protein | AX767_RS02720 | Not Available | Positive | 529115 - 529495 | 13650.5 |
| lytr/algr family response regulator transcription factor | AX767_RS02725 | Not Available | Positive | 529513 - 530349 | 30117.4 |
| hypothetical protein | AX767_RS02730 | Not Available | Negative | 530431 - 530781 | 12681.8 |
| glutamine--trna ligase/yqey domain fusion protein | AX767_RS02735 | Not Available | Positive | 530915 - 532759 | 68071.1 |
| giy-yig nuclease family protein | AX767_RS02740 | Not Available | Positive | 532831 - 533700 | 31288.3 |
| restriction endonuclease | AX767_RS02745 | Not Available | Positive | 534123 - 535019 | 32629.3 |
| lyse family translocator | AX767_RS02750 | Not Available | Negative | 535189 - 535815 | 21911.5 |
| hypothetical protein | AX767_RS02755 | Not Available | Positive | 535946 - 536446 | 17999.4 |
| gsu2403 family nucleotidyltransferase fold protein | AX767_RS02760 | Not Available | Positive | 536507 - 537457 | 35762.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
