Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | AX767_RS02660 | Not Available | Negative | 513968 - 514879 | 33086.9 |
| aspartate aminotransferase family protein | AX767_RS02665 | Not Available | Negative | 514938 - 516269 | 47197.8 |
| murr/rpir family transcriptional regulator | AX767_RS02670 | Not Available | Positive | 516393 - 517262 | 31284.6 |
| efflux transporter outer membrane subunit | AX767_RS02675 | Not Available | Negative | 517362 - 518801 | 50616.7 |
| efflux rnd transporter permease subunit | AX767_RS02680 | Not Available | Negative | 518798 - 522001 | 113742.0 |
| serine hydrolase domain-containing protein | AX767_RS02685 | Not Available | Negative | 521998 - 525101 | 109721.0 |
| serine hydrolase domain-containing protein | AX767_RS02690 | Not Available | Negative | 525098 - 526589 | 55043.6 |
| duf6622 family protein | AX767_RS02700 | Not Available | Positive | 526850 - 527371 | 18602.4 |
| 2tm domain-containing protein | AX767_RS02705 | Not Available | Positive | 527402 - 527698 | 10758.3 |
| sensor histidine kinase | AX767_RS02710 | Not Available | Positive | 527743 - 528804 | 38085.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
