Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate regulatory protein | AX767_RS02515 | Not Available | Positive | 486096 - 487367 | 47066.2 |
| hypothetical protein | AX767_RS21230 | Not Available | Positive | 487573 - 487779 | 7640.16 |
| dna-binding protein ybib | AX767_RS02520 | Not Available | Positive | 488008 - 488913 | 31817.8 |
| uroporphyrinogen-iii c-methyltransferase | AX767_RS02525 | Not Available | Positive | 488910 - 489707 | 27393.2 |
| yaef family permuted papain-like enzyme | AX767_RS02530 | Not Available | Positive | 489717 - 490505 | 27819.9 |
| nad(p)/fad-dependent oxidoreductase | AX767_RS02535 | Not Available | Positive | 490511 - 491713 | 43019.5 |
| 30s ribosomal protein s21 | AX767_RS02540 | Not Available | Positive | 491821 - 492033 | 8490.61 |
| gatb/yqey domain-containing protein | AX767_RS02545 | Not Available | Positive | 492132 - 492581 | 15932.5 |
| metalloprotease pmba | AX767_RS02550 | Not Available | Negative | 492593 - 493975 | 49059.9 |
| ribosome biogenesis factor yjga | AX767_RS02555 | Not Available | Positive | 494034 - 494690 | 24542.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
