Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug effflux mfs transporter | AX767_RS02265 | Not Available | Positive | 435111 - 436301 | 41196.8 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | AX767_RS02270 | Not Available | Positive | 436291 - 437232 | 34068.0 |
| abc transporter atp-binding protein | AX767_RS02275 | Not Available | Positive | 437229 - 437882 | 22983.7 |
| 3-oxo-tetronate kinase | AX767_RS02280 | Not Available | Positive | 437890 - 439170 | 43805.3 |
| aldolase | AX767_RS02285 | Not Available | Positive | 439175 - 439867 | 24304.1 |
| yoak family protein | AX767_RS02290 | Not Available | Negative | 439892 - 440680 | 28150.5 |
| threo-3-hydroxy-l-aspartate ammonia-lyase | AX767_RS02295 | Not Available | Negative | 440695 - 441660 | 34047.8 |
| gaf domain-containing protein | AX767_RS02300 | Not Available | Positive | 441807 - 442340 | 19545.7 |
| abc transporter permease | AX767_RS02305 | Not Available | Positive | 442377 - 444983 | 90016.9 |
| lipocalin-like domain-containing protein | AX767_RS02310 | Not Available | Positive | 444986 - 446050 | 39165.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
