Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | AX767_RS02215 | Not Available | Negative | 424990 - 425904 | 34255.8 |
| tripartite tricarboxylate transporter substrate binding protein buge | AX767_RS02220 | Not Available | Negative | 425972 - 426946 | 34114.6 |
| aec family transporter | AX767_RS02225 | Not Available | Positive | 427045 - 427962 | 32485.9 |
| serine hydrolase domain-containing protein | AX767_RS02230 | Not Available | Negative | 427928 - 429009 | 38875.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | AX767_RS02235 | Not Available | Positive | 429067 - 429558 | 17742.1 |
| serine hydrolase domain-containing protein | AX767_RS02240 | Not Available | Positive | 429555 - 431014 | 51583.7 |
| glycine zipper domain-containing protein | AX767_RS02245 | Not Available | Positive | 431127 - 431408 | 9169.81 |
| deda family protein | AX767_RS02250 | Not Available | Negative | 431464 - 432126 | 24556.3 |
| dna mismatch repair endonuclease mutl | AX767_RS02255 | Not Available | Positive | 432175 - 434031 | 67028.6 |
| serine hydrolase domain-containing protein | AX767_RS02260 | Not Available | Positive | 434146 - 435029 | 31689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
