Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | AX767_RS20745 | Not Available | Positive | 4304234 - 4304737 | 17860.2 |
| nad(p)h-dependent flavin oxidoreductase | AX767_RS20750 | Not Available | Negative | 4304744 - 4305721 | 35059.7 |
| enoyl-coa hydratase | AX767_RS20755 | Not Available | Negative | 4305756 - 4306583 | 29162.0 |
| duf6999 family protein | AX767_RS20760 | Not Available | Negative | 4306707 - 4307630 | 34680.1 |
| stld/darb family beta-ketosynthase | AX767_RS20765 | Not Available | Negative | 4307641 - 4309542 | 69675.6 |
| fatty acid desaturase | AX767_RS20770 | Not Available | Negative | 4309552 - 4310463 | 34952.4 |
| sterol desaturase family protein | AX767_RS20775 | Not Available | Negative | 4310465 - 4311229 | 29153.4 |
| aldehyde dehydrogenase family protein | AX767_RS20780 | Not Available | Positive | 4311291 - 4312724 | 51235.0 |
| duf2325 domain-containing protein | AX767_RS20785 | Not Available | Positive | 4312780 - 4313334 | 20121.1 |
| zip family metal transporter | AX767_RS20790 | Not Available | Negative | 4313345 - 4314253 | 30974.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
