Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | AX767_RS20545 | Not Available | Negative | 4260552 - 4261544 | 34364.7 |
| isocitrate lyase/pep mutase family protein | AX767_RS20550 | Not Available | Negative | 4261577 - 4262440 | 31191.5 |
| tripartite tricarboxylate transporter substrate binding protein | AX767_RS20555 | Not Available | Negative | 4262448 - 4263437 | 34520.9 |
| hydroxymethylglutaryl-coa lyase | AX767_RS20560 | Not Available | Negative | 4263434 - 4264384 | 33457.2 |
| caib/baif coa transferase family protein | AX767_RS20565 | Not Available | Negative | 4264381 - 4265580 | 43032.9 |
| propionate catabolism operon regulatory protein prpr | AX767_RS20570 | Not Available | Positive | 4265745 - 4267712 | 72388.8 |
| degq family serine endoprotease | AX767_RS20575 | Not Available | Negative | 4267740 - 4269215 | 50318.2 |
| atp-binding protein | AX767_RS20580 | Not Available | Negative | 4269287 - 4270648 | 48412.5 |
| response regulator | AX767_RS20585 | Not Available | Negative | 4270645 - 4271304 | 24572.0 |
| iclr family transcriptional regulator domain-containing protein | AX767_RS20590 | Not Available | Negative | 4271320 - 4272090 | 27669.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
