Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2126 domain-containing protein | AX767_RS01970 | Not Available | Positive | 376296 - 379808 | 130656.0 |
| serine hydrolase domain-containing protein | AX767_RS01975 | Not Available | Positive | 379843 - 382556 | 97852.6 |
| transglutaminase family protein | AX767_RS01980 | Not Available | Positive | 382599 - 383540 | 34702.8 |
| rida family protein | AX767_RS01985 | Not Available | Positive | 383563 - 384021 | 15696.1 |
| laci family dna-binding transcriptional regulator | AX767_RS01990 | Not Available | Negative | 384018 - 385079 | 37232.6 |
| 2-hydroxyacid dehydrogenase | AX767_RS01995 | Not Available | Negative | 385076 - 386059 | 34690.1 |
| sugar kinase | AX767_RS02000 | Not Available | Negative | 386056 - 387006 | 33423.6 |
| sugar phosphate isomerase/epimerase family protein | AX767_RS02005 | Not Available | Negative | 387014 - 387751 | 26094.4 |
| amino acid abc transporter atp-binding protein | AX767_RS02010 | Not Available | Negative | 387748 - 388506 | 27841.1 |
| transporter substrate-binding domain-containing protein | AX767_RS02015 | Not Available | Negative | 388533 - 389330 | 28076.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
