Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter substrate-binding protein | AX767_RS20345 | Not Available | Negative | 4221201 - 4222247 | 37812.9 |
| oxidative damage protection protein | AX767_RS20350 | Not Available | Positive | 4222384 - 4222653 | 10255.3 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | AX767_RS20355 | Not Available | Positive | 4222760 - 4224568 | 64450.8 |
| transglutaminase family protein | AX767_RS20360 | Not Available | Positive | 4224589 - 4225491 | 33039.1 |
| alpha/beta hydrolase | AX767_RS20365 | Not Available | Positive | 4225619 - 4227172 | 54249.8 |
| duf4174 domain-containing protein | AX767_RS20370 | Not Available | Negative | 4227182 - 4227607 | 15041.5 |
| extensin family protein | AX767_RS20375 | Not Available | Positive | 4227695 - 4228435 | 26245.1 |
| sensor histidine kinase | AX767_RS20380 | Not Available | Negative | 4228449 - 4229927 | 53452.7 |
| response regulator transcription factor | AX767_RS20385 | Not Available | Negative | 4229924 - 4230649 | 27048.7 |
| cytochrome b/b6 domain-containing protein | AX767_RS20390 | Not Available | Positive | 4230746 - 4231396 | 23554.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
