Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | AX767_RS20200 | Not Available | Positive | 4190437 - 4191123 | 25657.8 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | AX767_RS20205 | Not Available | Positive | 4191150 - 4192805 | 58578.4 |
| doxx family protein | AX767_RS20210 | Not Available | Positive | 4192852 - 4193256 | 13935.7 |
| peptide deformylase | AX767_RS20215 | Not Available | Negative | 4193268 - 4193807 | 19863.8 |
| hypothetical protein | AX767_RS21115 | Not Available | Negative | 4193804 - 4194256 | 15624.4 |
| nad-dependent dna ligase liga | AX767_RS20220 | Not Available | Negative | 4194345 - 4196423 | 75343.9 |
| smp-30/gluconolactonase/lre family protein | AX767_RS20225 | Not Available | Negative | 4196532 - 4198166 | 57531.2 |
| cell division protein zipa c-terminal ftsz-binding domain-containing protein | AX767_RS20230 | Not Available | Negative | 4198270 - 4199367 | 38778.9 |
| chromosome segregation protein smc | AX767_RS20235 | Not Available | Negative | 4199387 - 4202902 | 130181.0 |
| hypothetical protein | AX767_RS20240 | Not Available | Positive | 4202997 - 4203755 | 27970.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
