Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | AX767_RS20150 | Not Available | Negative | 4176139 - 4177371 | 44878.7 |
| 3-(methylthio)propionyl-coa ligase | AX767_RS20155 | Not Available | Negative | 4177412 - 4179055 | 60222.3 |
| protein adenylyltransferase selo | AX767_RS20160 | Not Available | Positive | 4179205 - 4180686 | 54045.1 |
| peptide-methionine (r)-s-oxide reductase msrb | AX767_RS20165 | Not Available | Positive | 4180683 - 4181093 | 14846.4 |
| septation protein a | AX767_RS20170 | Not Available | Positive | 4181106 - 4181645 | 20469.7 |
| bola family protein | AX767_RS20175 | Not Available | Positive | 4181642 - 4181926 | 10005.8 |
| peptidylprolyl isomerase | AX767_RS20180 | Not Available | Positive | 4181985 - 4182770 | 29015.0 |
| phosphoribosylformylglycinamidine synthase | AX767_RS20185 | Not Available | Negative | 4182833 - 4186879 | 144171.0 |
| type i methionyl aminopeptidase | AX767_RS20190 | Not Available | Positive | 4186994 - 4187818 | 29861.7 |
| [protein-pii] uridylyltransferase | AX767_RS20195 | Not Available | Positive | 4187820 - 4190423 | 97710.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
