Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | AX767_RS20870 | Not Available | Negative | 364170 - 365398 | 46775.9 |
| hypothetical protein | AX767_RS01930 | Not Available | Negative | 365370 - 366140 | 28013.7 |
| hlyd family type i secretion periplasmic adaptor subunit | AX767_RS21755 | Not Available | Negative | 366504 - 367406 | 33221.5 |
| biotin/lipoyl-binding protein | AX767_RS21760 | Not Available | Negative | 367367 - 367942 | 20684.2 |
| transcriptional regulator | AX767_RS01940 | Not Available | Positive | 368044 - 368367 | 12035.5 |
| helix-turn-helix domain-containing protein | AX767_RS01945 | Not Available | Positive | 368351 - 368641 | 10564.8 |
| type i secretion system permease/atpase | AX767_RS01950 | Not Available | Negative | 368706 - 370946 | 81328.5 |
| alpha-e domain-containing protein | AX767_RS01955 | Not Available | Negative | 371119 - 372075 | 36527.3 |
| circularly permuted type 2 atp-grasp protein | AX767_RS01960 | Not Available | Negative | 372096 - 373595 | 55720.0 |
| dna internalization-related competence protein comec/rec2 | AX767_RS01965 | Not Available | Negative | 373678 - 376140 | 88231.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
