Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | AX767_RS20005 | Not Available | Negative | 4144254 - 4144670 | 15047.0 |
| acetate kinase | AX767_RS20010 | Not Available | Positive | 4144824 - 4145930 | 38336.0 |
| phosphoketolase | AX767_RS20015 | Not Available | Positive | 4145927 - 4148296 | 87081.9 |
| plp-dependent aminotransferase family protein | AX767_RS20020 | Not Available | Negative | 4148315 - 4149748 | 51862.5 |
| carboxymuconolactone decarboxylase family protein | AX767_RS20025 | Not Available | Positive | 4149850 - 4150290 | 16227.4 |
| mfs transporter | AX767_RS20030 | Not Available | Positive | 4150299 - 4151873 | 54934.9 |
| branched-chain amino acid abc transporter substrate-binding protein | AX767_RS20035 | Not Available | Positive | 4151944 - 4153173 | 44052.7 |
| long-chain-fatty-acid--coa ligase | AX767_RS20040 | Not Available | Positive | 4153178 - 4154833 | 59715.1 |
| hypothetical protein | AX767_RS22085 | Not Available | Positive | 4155015 - 4155146 | 4672.66 |
| hypothetical protein | AX767_RS20045 | Not Available | Positive | 4155208 - 4155585 | 13701.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
