Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tex family protein | AX767_RS19955 | Not Available | Negative | 4131641 - 4134016 | 86324.0 |
| galactose oxidase early set domain-containing protein | AX767_RS19960 | Not Available | Negative | 4134089 - 4135915 | 63116.1 |
| hypothetical protein | AX767_RS19965 | Not Available | Positive | 4136021 - 4136539 | 19700.8 |
| mate family efflux transporter | AX767_RS19970 | Not Available | Positive | 4136577 - 4137959 | 48525.2 |
| pqic family protein | AX767_RS19975 | Not Available | Negative | 4137964 - 4138581 | 21165.3 |
| intermembrane transport protein pqib | AX767_RS19980 | Not Available | Negative | 4138578 - 4140230 | 60133.3 |
| paraquat-inducible protein a | AX767_RS19985 | Not Available | Negative | 4140227 - 4140877 | 23810.3 |
| paraquat-inducible protein a | AX767_RS19990 | Not Available | Negative | 4140874 - 4141497 | 22538.2 |
| mfs transporter | AX767_RS19995 | Not Available | Negative | 4141499 - 4142938 | 48998.2 |
| multidrug effflux mfs transporter | AX767_RS20000 | Not Available | Negative | 4142951 - 4144138 | 40884.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
