Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit iv | AX767_RS19615 | Not Available | Positive | 4070506 - 4070826 | 10922.3 |
| marr family winged helix-turn-helix transcriptional regulator | AX767_RS19620 | Not Available | Negative | 4070798 - 4071277 | 17784.2 |
| hypothetical protein | AX767_RS19625 | Not Available | Positive | 4071506 - 4071730 | 7843.08 |
| murein hydrolase activator envc family protein | AX767_RS21995 | Not Available | Positive | 4072017 - 4072313 | 10511.5 |
| sh3 domain-containing protein | AX767_RS19635 | Not Available | Positive | 4072354 - 4072809 | 17140.0 |
| mechanosensitive ion channel family protein | AX767_RS19640 | Not Available | Positive | 4072812 - 4073738 | 33601.1 |
| taxi family trap transporter solute-binding subunit | AX767_RS19645 | Not Available | Positive | 4073773 - 4074750 | 34081.2 |
| trap transporter permease | AX767_RS19650 | Not Available | Positive | 4074747 - 4076804 | 72330.8 |
| duf1850 domain-containing protein | AX767_RS19655 | Not Available | Positive | 4076808 - 4077242 | 16012.8 |
| duf2254 domain-containing protein | AX767_RS19660 | Not Available | Positive | 4077202 - 4078521 | 46625.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
