Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor nusa | AX767_RS19515 | Not Available | Positive | 4047906 - 4049390 | 55003.6 |
| translation initiation factor if-2 | AX767_RS19520 | Not Available | Positive | 4049415 - 4052339 | 104227.0 |
| 30s ribosome-binding factor rbfa | AX767_RS19525 | Not Available | Positive | 4052361 - 4052732 | 13776.6 |
| trna pseudouridine(55) synthase trub | AX767_RS19530 | Not Available | Positive | 4052735 - 4053715 | 35064.1 |
| translational gtpase typa | AX767_RS19535 | Not Available | Positive | 4053712 - 4055550 | 67452.2 |
| hypothetical protein | AX767_RS19540 | Not Available | Positive | 4055608 - 4056390 | 27383.4 |
| dmt family transporter | AX767_RS19545 | Not Available | Positive | 4056387 - 4057295 | 32206.3 |
| atp-binding protein | AX767_RS19550 | Not Available | Negative | 4057350 - 4057739 | 13588.3 |
| ssra-binding protein smpb | AX767_RS19555 | Not Available | Negative | 4057832 - 4058311 | 18256.1 |
| type ii toxin-antitoxin system rata family toxin | AX767_RS19560 | Not Available | Positive | 4058374 - 4058826 | 16415.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
