Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system beta propeller repeat protein tolb | AX767_RS19320 | Not Available | Positive | 4005890 - 4007143 | 44531.4 |
| peptidoglycan-associated lipoprotein pal | AX767_RS19325 | Not Available | Positive | 4007163 - 4007675 | 18027.3 |
| tol-pal system protein ybgf | AX767_RS19330 | Not Available | Positive | 4007678 - 4008427 | 27551.5 |
| thif family adenylyltransferase | AX767_RS19335 | Not Available | Positive | 4008439 - 4009257 | 28784.4 |
| Trna-lys | Not Available | Not Available | Positive | 4009289 - 4009364 | Not Available |
| eal and hdod domain-containing protein | AX767_RS19345 | Not Available | Negative | 4009490 - 4010734 | 44523.0 |
| gaf domain-containing protein | AX767_RS19350 | Not Available | Negative | 4010783 - 4011493 | 26290.0 |
| hypothetical protein | AX767_RS19355 | Not Available | Negative | 4011624 - 4011848 | 8023.41 |
| hypothetical protein | AX767_RS19360 | Not Available | Negative | 4012022 - 4012603 | 20518.5 |
| abc-f family atp-binding cassette domain-containing protein | AX767_RS19365 | Not Available | Negative | 4012619 - 4014592 | 71487.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
