Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rid family hydrolase | AX767_RS19270 | Not Available | Negative | 3995826 - 3996848 | 36575.2 |
| yebc/pmpr family dna-binding transcriptional regulator | AX767_RS19275 | Not Available | Positive | 3997076 - 3997801 | 26175.9 |
| phosphoribosylamine--glycine ligase | AX767_RS19280 | Not Available | Positive | 3997798 - 3999093 | 46061.2 |
| oxygen-dependent coproporphyrinogen oxidase | AX767_RS19285 | Not Available | Positive | 3999090 - 4000007 | 34570.9 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | AX767_RS19290 | Not Available | Positive | 3999998 - 4000624 | 22219.7 |
| ribosome silencing factor | AX767_RS19295 | Not Available | Positive | 4000624 - 4001292 | 23717.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | AX767_RS19300 | Not Available | Positive | 4001289 - 4001756 | 17208.8 |
| maf family protein | AX767_RS19305 | Not Available | Positive | 4001753 - 4002358 | 21504.2 |
| ribonuclease g | AX767_RS19310 | Not Available | Positive | 4002364 - 4003890 | 56219.7 |
| lipid a export permease/atp-binding protein msba | AX767_RS19315 | Not Available | Negative | 4003901 - 4005622 | 61900.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
