Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | AX767_RS19170 | Not Available | Positive | 3978139 - 3978720 | 21472.0 |
| duf1109 domain-containing protein | AX767_RS19175 | Not Available | Positive | 3978717 - 3979358 | 22387.4 |
| duf1993 domain-containing protein | AX767_RS19180 | Not Available | Negative | 3979436 - 3979945 | 18569.4 |
| metal-dependent hydrolase | AX767_RS19185 | Not Available | Negative | 3980048 - 3981052 | 36727.1 |
| helicase hera-like domain-containing protein | AX767_RS19190 | Not Available | Negative | 3981065 - 3982585 | 53579.2 |
| phosphopantetheine-binding protein | AX767_RS19195 | Not Available | Positive | 3982681 - 3982992 | 11009.9 |
| hypothetical protein | AX767_RS19200 | Not Available | Positive | 3982996 - 3983634 | 23064.4 |
| amp-binding protein | AX767_RS19205 | Not Available | Positive | 3983631 - 3985313 | 59177.6 |
| acyl-coa synthetase | AX767_RS19210 | Not Available | Positive | 3985330 - 3986322 | 37582.2 |
| lola-related protein | AX767_RS19215 | Not Available | Positive | 3986294 - 3986899 | 21960.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
