Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope biogenesis protein tola | AX767_RS19070 | Not Available | Negative | 3955360 - 3955677 | 10675.8 |
| nadp-dependent isocitrate dehydrogenase | AX767_RS19075 | Not Available | Positive | 3955874 - 3957133 | 45759.2 |
| atp-dependent clp protease adapter clps | AX767_RS19080 | Not Available | Positive | 3957211 - 3957570 | 13280.1 |
| atp-dependent clp protease atp-binding subunit clpa | AX767_RS19085 | Not Available | Positive | 3957638 - 3959959 | 84463.5 |
| hypothetical protein | AX767_RS19090 | Not Available | Positive | 3960042 - 3960371 | 11232.3 |
| cardiolipin synthase | AX767_RS19095 | Not Available | Positive | 3960406 - 3961851 | 53195.5 |
| exodeoxyribonuclease i | AX767_RS19100 | Not Available | Positive | 3961855 - 3963294 | 54035.0 |
| nad-dependent protein deacetylase | AX767_RS19105 | Not Available | Positive | 3963333 - 3964205 | 31268.9 |
| pas domain-containing sensor histidine kinase | AX767_RS19110 | Not Available | Positive | 3964180 - 3965328 | 42053.8 |
| branched-chain amino acid abc transporter substrate-binding protein | AX767_RS19115 | Not Available | Negative | 3965325 - 3966554 | 44384.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
