Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | AX767_RS01820 | Not Available | Negative | 331887 - 333677 | 63807.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | AX767_RS01825 | Not Available | Negative | 333753 - 334685 | 31408.4 |
| electron transfer flavoprotein subunit beta/fixa family protein | AX767_RS01830 | Not Available | Negative | 334687 - 335436 | 26865.1 |
| mechanosensitive ion channel family protein | AX767_RS01835 | Not Available | Negative | 335576 - 336853 | 46426.3 |
| histone deacetylase family protein | AX767_RS01840 | Not Available | Negative | 336859 - 337812 | 35086.8 |
| aaa family atpase | AX767_RS01845 | Not Available | Positive | 337888 - 338808 | 32846.8 |
| duf58 domain-containing protein | AX767_RS01850 | Not Available | Positive | 338805 - 339782 | 35498.1 |
| transglutaminasetgpa domain-containing protein | AX767_RS01855 | Not Available | Positive | 339776 - 341794 | 74248.0 |
| lytic murein transglycosylase b | AX767_RS01860 | Not Available | Positive | 341826 - 342905 | 39035.7 |
| histidine phosphatase family protein | AX767_RS01865 | Not Available | Negative | 342945 - 343490 | 19538.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
