Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor ts | AX767_RS18820 | Not Available | Positive | 3908142 - 3909065 | 32396.0 |
| ump kinase | AX767_RS18825 | Not Available | Positive | 3909110 - 3909832 | 25481.2 |
| ribosome recycling factor | AX767_RS18830 | Not Available | Positive | 3909846 - 3910406 | 20587.7 |
| polyprenyl diphosphate synthase | AX767_RS18835 | Not Available | Positive | 3910408 - 3911142 | 27005.2 |
| phosphatidate cytidylyltransferase | AX767_RS18840 | Not Available | Positive | 3911172 - 3912032 | 30261.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | AX767_RS18845 | Not Available | Positive | 3912029 - 3913216 | 42079.8 |
| rip metalloprotease rsep | AX767_RS18850 | Not Available | Positive | 3913241 - 3914614 | 49085.3 |
| outer membrane protein assembly factor bama | AX767_RS18855 | Not Available | Positive | 3914652 - 3917114 | 90547.4 |
| omph family outer membrane protein | AX767_RS18860 | Not Available | Positive | 3917114 - 3917644 | 19928.6 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | AX767_RS18865 | Not Available | Positive | 3917658 - 3918644 | 34315.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
