Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS21105 | Not Available | Positive | 3897041 - 3897406 | 13235.8 |
| polyhydroxyalkanoate synthesis repressor phar | AX767_RS18775 | Not Available | Positive | 3897513 - 3898046 | 20047.5 |
| 30s ribosomal protein s12 methylthiotransferase rimo | AX767_RS18780 | Not Available | Positive | 3898086 - 3899492 | 50885.5 |
| Trna-leu | Not Available | Not Available | Positive | 3899586 - 3899670 | Not Available |
| ribonuclease r | AX767_RS18790 | Not Available | Positive | 3899755 - 3902049 | 84499.5 |
| sdr family oxidoreductase | AX767_RS18795 | Not Available | Positive | 3902082 - 3902846 | 26655.1 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | AX767_RS18800 | Not Available | Negative | 3902860 - 3904329 | 50047.2 |
| d-amino acid dehydrogenase | AX767_RS18805 | Not Available | Negative | 3904364 - 3905623 | 45037.6 |
| amidase | AX767_RS18810 | Not Available | Negative | 3905761 - 3907086 | 45961.0 |
| 30s ribosomal protein s2 | AX767_RS18815 | Not Available | Positive | 3907305 - 3908060 | 27473.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
