Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | AX767_RS18725 | Not Available | Negative | 3885191 - 3888673 | 129437.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | AX767_RS18730 | Not Available | Positive | 3888789 - 3889502 | 24744.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | AX767_RS18735 | Not Available | Positive | 3889499 - 3889984 | 16859.4 |
| sensor histidine kinase | AX767_RS18740 | Not Available | Negative | 3889988 - 3891388 | 51669.2 |
| two-component system response regulator ompr | AX767_RS18745 | Not Available | Negative | 3891459 - 3892190 | 27249.8 |
| hypothetical protein | AX767_RS18750 | Not Available | Positive | 3892362 - 3892706 | 12743.4 |
| simpl domain-containing protein | AX767_RS18755 | Not Available | Positive | 3892779 - 3893468 | 24359.9 |
| alpha/beta fold hydrolase | AX767_RS18760 | Not Available | Positive | 3893546 - 3894496 | 33532.9 |
| rela/spot family protein | AX767_RS18765 | Not Available | Positive | 3894529 - 3896733 | 80585.5 |
| Trna-val | Not Available | Not Available | Positive | 3896782 - 3896858 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
